Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 HBZP1-201ENST00000354915 429 ntBASIC20.62■□□□□ 0.89
SMC3Q9UQE7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.62■□□□□ 0.89
SMC3Q9UQE7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 AC097493.4-201ENST00000641197 219 ntBASIC20.62■□□□□ 0.89
SMC3Q9UQE7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMC3Q9UQE7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 AC096633.1-201ENST00000422446 749 ntBASIC20.61■□□□□ 0.89
SMC3Q9UQE7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 AC005332.3-201ENST00000589904 676 ntBASIC20.61■□□□□ 0.89
SMC3Q9UQE7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 AL139327.4-201ENST00000612362 153 ntBASIC20.61■□□□□ 0.89
SMC3Q9UQE7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMC3Q9UQE7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 TSPY5P-201ENST00000426936 936 ntBASIC20.6■□□□□ 0.89
SMC3Q9UQE7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 AC124067.4-201ENST00000519691 2379 ntBASIC20.6■□□□□ 0.89
SMC3Q9UQE7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMC3Q9UQE7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 AC005521.1-201ENST00000393351 872 ntBASIC20.59■□□□□ 0.89
SMC3Q9UQE7 RNF152P1-201ENST00000397754 604 ntBASIC20.59■□□□□ 0.89
SMC3Q9UQE7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 AC112907.2-201ENST00000448639 330 ntBASIC20.59■□□□□ 0.89
SMC3Q9UQE7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 HOMER2P1-201ENST00000455653 964 ntBASIC20.59■□□□□ 0.89
SMC3Q9UQE7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 VENTXP5-201ENST00000523979 775 ntBASIC20.59■□□□□ 0.89
SMC3Q9UQE7 AC073912.3-201ENST00000624414 853 ntBASIC20.59■□□□□ 0.89
SMC3Q9UQE7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMC3Q9UQE7 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms