Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 AC009336.1-201ENST00000608941 1553 ntBASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 AC135050.7-201ENST00000624508 2218 ntBASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 HTR7P1-202ENST00000624664 4411 ntBASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 KRT18P58-201ENST00000527480 1120 ntBASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 AC117500.6-201ENST00000624871 588 ntBASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 ZNF259P1-201ENST00000407656 1365 ntBASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCF1Q9UBD9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCF1Q9UBD9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 AC073621.1-201ENST00000392730 636 ntBASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 AL356488.2-201ENST00000602755 427 ntBASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 AC004706.3-202ENST00000621574 984 ntBASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCF1Q9UBD9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms