Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 AC003669.1-201ENST00000334569 611 ntBASIC16.11■□□□□ 0.17
LRFN1Q9P244 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 AC019129.2-201ENST00000609837 1235 ntBASIC16.11■□□□□ 0.17
LRFN1Q9P244 AC117500.6-201ENST00000624871 588 ntBASIC16.11■□□□□ 0.17
LRFN1Q9P244 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRFN1Q9P244 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRFN1Q9P244 AC104109.2-201ENST00000602919 1418 ntBASIC16.11■□□□□ 0.17
LRFN1Q9P244 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 KRT18P55-202ENST00000578578 1546 ntBASIC16.1■□□□□ 0.17
LRFN1Q9P244 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 MIR940-201ENST00000401276 94 ntBASIC16.1■□□□□ 0.17
LRFN1Q9P244 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.1■□□□□ 0.17
LRFN1Q9P244 AC006557.2-201ENST00000592985 1240 ntBASIC16.1■□□□□ 0.17
LRFN1Q9P244 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 AC006538.3-201ENST00000612495 578 ntBASIC16.1■□□□□ 0.17
LRFN1Q9P244 MIR1199-201ENST00000621445 119 ntBASIC16.1■□□□□ 0.17
LRFN1Q9P244 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRFN1Q9P244 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 AP002414.3-201ENST00000589352 1468 ntBASIC16.1■□□□□ 0.17
LRFN1Q9P244 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.1■□□□□ 0.17
LRFN1Q9P244 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 SIGLEC30P-201ENST00000455569 941 ntBASIC16.09■□□□□ 0.17
LRFN1Q9P244 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 POLD2P1-201ENST00000511220 997 ntBASIC16.09■□□□□ 0.17
LRFN1Q9P244 AC145285.3-201ENST00000564603 959 ntBASIC16.09■□□□□ 0.17
LRFN1Q9P244 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 TERC-201ENST00000602385 541 ntBASIC16.09■□□□□ 0.17
LRFN1Q9P244 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.09■□□□□ 0.17
LRFN1Q9P244 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRFN1Q9P244 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms