Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 RBPMS2P1-201ENST00000437762 623 ntBASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 AC008677.1-201ENST00000519230 1561 ntBASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXXC1Q9P0U4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 RN7SL589P-201ENST00000481268 310 ntBASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 AC002558.1-201ENST00000488906 803 ntBASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 AL135744.1-201ENST00000565098 629 ntBASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 AC116407.2-201ENST00000613639 860 ntBASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 MIR6752-201ENST00000618442 71 ntBASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.67■□□□□ 0.58
CXXC1Q9P0U4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 AL031598.1-201ENST00000561511 1773 ntBASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 OR8S1-201ENST00000310194 1080 ntBASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 AC022494.1-201ENST00000466044 728 ntBASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 AC140878.1-201ENST00000565277 250 ntBASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXXC1Q9P0U4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms