Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.21■□□□□ 0.03
TREM2Q9NZC2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
TREM2Q9NZC2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.21■□□□□ 0.02
TREM2Q9NZC2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.21■□□□□ 0.02
TREM2Q9NZC2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TREM2Q9NZC2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TREM2Q9NZC2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TREM2Q9NZC2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TREM2Q9NZC2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 LINC00896-202ENST00000609602 2128 ntBASIC15.2■□□□□ 0.02
TREM2Q9NZC2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 AL162727.3-201ENST00000635661 2787 ntBASIC15.2■□□□□ 0.02
TREM2Q9NZC2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 TSPY19P-201ENST00000418461 509 ntBASIC15.2■□□□□ 0.02
TREM2Q9NZC2 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 TSPY18P-201ENST00000441642 509 ntBASIC15.2■□□□□ 0.02
TREM2Q9NZC2 MTCL1P1-201ENST00000446207 792 ntBASIC15.2■□□□□ 0.02
TREM2Q9NZC2 KRT17P6-201ENST00000453795 1220 ntBASIC15.2■□□□□ 0.02
TREM2Q9NZC2 VENTXP7-201ENST00000475503 772 ntBASIC15.2■□□□□ 0.02
TREM2Q9NZC2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TREM2Q9NZC2 AL596257.1-201ENST00000641463 2694 ntBASIC15.2■□□□□ 0.02
TREM2Q9NZC2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 AC009154.2-201ENST00000621177 724 ntBASIC15.19■□□□□ 0.02
TREM2Q9NZC2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 AC006116.8-202ENST00000587620 1550 ntBASIC15.19■□□□□ 0.02
TREM2Q9NZC2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TREM2Q9NZC2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TREM2Q9NZC2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TREM2Q9NZC2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms