Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 AGGF1P2-201ENST00000426656 2106 ntBASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 HLA-J-201ENST00000462773 1622 ntBASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 HOXB1-202ENST00000577092 1414 ntBASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 KRT18P23-201ENST00000435622 1283 ntBASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 RARRES2P10-201ENST00000564312 460 ntBASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 AC073648.6-201ENST00000641589 218 ntBASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SND1-IT1Q9HBX3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 KRT8P7-201ENST00000533003 1432 ntBASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 MESTP1-201ENST00000404287 994 ntBASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC11.78□□□□□ -0.52
SND1-IT1Q9HBX3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms