Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 AC006504.4-201ENST00000592118 1568 ntBASIC20.42■□□□□ 0.86
SH2D4AQ9H788 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 AC005104.2-201ENST00000427818 678 ntBASIC20.41■□□□□ 0.86
SH2D4AQ9H788 DNAJB3-201ENST00000446806 729 ntBASIC20.41■□□□□ 0.86
SH2D4AQ9H788 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 AC005332.8-201ENST00000622750 2735 ntBASIC20.41■□□□□ 0.86
SH2D4AQ9H788 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH2D4AQ9H788 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 AC064836.3-201ENST00000607928 673 ntBASIC20.4■□□□□ 0.86
SH2D4AQ9H788 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SH2D4AQ9H788 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SH2D4AQ9H788 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 RPS15P9-201ENST00000494093 319 ntBASIC20.39■□□□□ 0.85
SH2D4AQ9H788 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 AC002347.1-201ENST00000569543 541 ntBASIC20.39■□□□□ 0.85
SH2D4AQ9H788 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 AC008667.4-201ENST00000607370 168 ntBASIC20.39■□□□□ 0.85
SH2D4AQ9H788 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH2D4AQ9H788 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms