Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 AC027601.4-201ENST00000611259 610 ntBASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BCAS3Q9H6U6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 AIRN-201ENST00000601203 4374 ntBASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 KRT18P2-201ENST00000447938 1258 ntBASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 AC092865.5-201ENST00000545435 363 ntBASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 AL589182.2-201ENST00000619332 1049 ntBASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BCAS3Q9H6U6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 AC003669.1-201ENST00000334569 611 ntBASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 MED15P5-201ENST00000423150 992 ntBASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 STK19B-204ENST00000512515 211 ntBASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 PCDHB18P-201ENST00000524813 2368 ntBASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BCAS3Q9H6U6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 KRT18P13-201ENST00000400056 1290 ntBASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 KRT18P3-201ENST00000451602 1288 ntBASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.66■□□□□ 0.74
BCAS3Q9H6U6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms