Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.08■□□□□ 0.65
HIPK3Q9H422 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.08■□□□□ 0.65
HIPK3Q9H422 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIPK3Q9H422 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIPK3Q9H422 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIPK3Q9H422 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIPK3Q9H422 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIPK3Q9H422 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIPK3Q9H422 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIPK3Q9H422 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIPK3Q9H422 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIPK3Q9H422 AC073592.3-201ENST00000625118 1834 ntBASIC19.08■□□□□ 0.64
HIPK3Q9H422 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIPK3Q9H422 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
HIPK3Q9H422 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIPK3Q9H422 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
HIPK3Q9H422 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
HIPK3Q9H422 FAM185BP-201ENST00000443595 716 ntBASIC19.07■□□□□ 0.64
HIPK3Q9H422 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.07■□□□□ 0.64
HIPK3Q9H422 AL513480.1-201ENST00000451731 511 ntBASIC19.07■□□□□ 0.64
HIPK3Q9H422 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HIPK3Q9H422 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.07■□□□□ 0.64
HIPK3Q9H422 AC112191.1-201ENST00000523689 701 ntBASIC19.07■□□□□ 0.64
HIPK3Q9H422 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
HIPK3Q9H422 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.07■□□□□ 0.64
HIPK3Q9H422 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIPK3Q9H422 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HIPK3Q9H422 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.06■□□□□ 0.64
HIPK3Q9H422 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 AP000974.1-201ENST00000623909 2387 ntBASIC19.06■□□□□ 0.64
HIPK3Q9H422 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 AC002558.1-201ENST00000488906 803 ntBASIC19.06■□□□□ 0.64
HIPK3Q9H422 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIPK3Q9H422 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.06■□□□□ 0.64
HIPK3Q9H422 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.05■□□□□ 0.64
HIPK3Q9H422 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.05■□□□□ 0.64
HIPK3Q9H422 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 MYCLP1-201ENST00000372451 1075 ntBASIC19.05■□□□□ 0.64
HIPK3Q9H422 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.05■□□□□ 0.64
HIPK3Q9H422 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HIPK3Q9H422 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.05■□□□□ 0.64
HIPK3Q9H422 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.05■□□□□ 0.64
HIPK3Q9H422 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.05■□□□□ 0.64
HIPK3Q9H422 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.05■□□□□ 0.64
HIPK3Q9H422 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIPK3Q9H422 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms