Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 AC020763.4-201ENST00000623414 4170 ntBASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCL11BQ9C0K0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 MIR943-201ENST00000401286 94 ntBASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 LINC00982-205ENST00000420957 435 ntBASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 AC069335.1-201ENST00000489972 472 ntBASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 STK25P1-201ENST00000585406 838 ntBASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCL11BQ9C0K0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 MEIS3P1-201ENST00000495167 958 ntBASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 PI4KAP1-204ENST00000612579 1703 ntBASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
BCL11BQ9C0K0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 AC002056.1-201ENST00000395613 760 ntBASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 AC005237.2-201ENST00000434368 219 ntBASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 KRT8P48-201ENST00000515599 1220 ntBASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 DUTP2-201ENST00000519164 463 ntBASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 AC008761.3-201ENST00000624803 892 ntBASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.66■■□□□ 1.22
BCL11BQ9C0K0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms