Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KRTAP3-3Q9BYR6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
KRTAP3-3Q9BYR6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KRTAP3-3Q9BYR6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC11.02□□□□□ -0.64
KRTAP3-3Q9BYR6 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 RNU4-61P-201ENST00000411243 107 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 RPS20P15-201ENST00000412792 311 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 EEF1A1P31-201ENST00000415978 1131 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 MTND2P23-201ENST00000422990 651 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01241-201ENST00000423326 1237 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 RFX3-AS1-202ENST00000427722 1088 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 NANOGP2-201ENST00000435391 727 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 SUMO2P2-201ENST00000456482 255 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 CCDC34P1-201ENST00000507441 517 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC026782.2-201ENST00000510845 636 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 Y_RNA.701-201ENST00000516812 110 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AP001000.1-201ENST00000526843 742 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 SMARCE1P3-201ENST00000553649 1231 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 NUTF2P6-201ENST00000560892 385 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC135628.1-201ENST00000568867 534 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC004706.1-201ENST00000576138 879 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AL161669.3-201ENST00000618272 777 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AC020763.5-201ENST00000623298 430 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 AL390318.1-201ENST00000624564 687 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 GAGE12F-202ENST00000639028 585 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 MTRNR2L1-201ENST00000540040 1553 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 ZNF519P1-201ENST00000449011 1626 ntBASIC11.02□□□□□ -0.65
KRTAP3-3Q9BYR6 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC008033.1-201ENST00000216407 1162 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 TTTY11-201ENST00000253470 837 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AL359885.1-201ENST00000415786 903 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 MTCO1P53-201ENST00000441633 699 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC114967.1-201ENST00000504890 259 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 MTCO3P9-201ENST00000506989 781 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC011362.1-201ENST00000507050 485 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC117503.2-201ENST00000538837 321 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC245505.1-201ENST00000556398 224 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AC074051.3-201ENST00000570238 358 ntBASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AL109920.1-201ENST00000632749 415 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms