Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 AP000997.3-201ENST00000623333 2250 ntBASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 AC090164.3-201ENST00000610780 2143 ntBASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 AC009093.7-201ENST00000623853 1223 ntBASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
RTFDC1Q9BY42 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 AL627223.1-201ENST00000416693 442 ntBASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 AL513480.1-201ENST00000451731 511 ntBASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTFDC1Q9BY42 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.14■□□□□ 0.98
RTFDC1Q9BY42 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.14■□□□□ 0.98
RTFDC1Q9BY42 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTFDC1Q9BY42 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTFDC1Q9BY42 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 SLC25A6P2-201ENST00000497974 877 ntBASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 AL390955.2-201ENST00000603032 514 ntBASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 AC239800.4-201ENST00000603712 296 ntBASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTFDC1Q9BY42 AL020996.1-203ENST00000536896 2307 ntBASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 AC002056.1-201ENST00000395613 760 ntBASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 AC099522.2-201ENST00000607001 744 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms