Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL355334.1-201ENST00000417713 215 ntBASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 CALR4P-201ENST00000431943 946 ntBASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 KLF2P4-201ENST00000451959 1225 ntBASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 KRT8P19-201ENST00000551916 1455 ntBASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL25A1Q9BXS0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AC092978.1-202ENST00000637590 1327 ntBASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 FAM21FP-201ENST00000426241 1131 ntBASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 ELK1P1-201ENST00000485699 580 ntBASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AC105129.2-201ENST00000559536 390 ntBASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AC015936.2-201ENST00000593177 259 ntBASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
COL25A1Q9BXS0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 PDIA3P1-201ENST00000471856 1510 ntBASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 BTBD7P1-201ENST00000447253 1453 ntBASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 CSF2RBP1-201ENST00000447905 391 ntBASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 FO681548.1-201ENST00000455617 1132 ntBASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 BTNL10-201ENST00000595971 695 ntBASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 AL009183.1-201ENST00000603760 355 ntBASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL25A1Q9BXS0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL25A1Q9BXS0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
COL25A1Q9BXS0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL25A1Q9BXS0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL25A1Q9BXS0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL25A1Q9BXS0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.52■□□□□ 0.39
COL25A1Q9BXS0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL25A1Q9BXS0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL25A1Q9BXS0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
COL25A1Q9BXS0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL25A1Q9BXS0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL25A1Q9BXS0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL25A1Q9BXS0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.51■□□□□ 0.39
COL25A1Q9BXS0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms