Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV9Q99603 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRGV9Q99603 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV9Q99603 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRGV9Q99603 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV9Q99603 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.7□□□□□ -0.22
TRGV9Q99603 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRGV9Q99603 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.7□□□□□ -0.22
TRGV9Q99603 AL353692.3-201ENST00000407031 1396 ntBASIC13.7□□□□□ -0.22
TRGV9Q99603 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRGV9Q99603 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 AL118508.1-201ENST00000613502 2345 ntBASIC13.69□□□□□ -0.22
TRGV9Q99603 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
TRGV9Q99603 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.69□□□□□ -0.22
TRGV9Q99603 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 MYCLP1-201ENST00000372451 1075 ntBASIC13.69□□□□□ -0.22
TRGV9Q99603 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.69□□□□□ -0.22
TRGV9Q99603 ATP5G1P1-201ENST00000448724 379 ntBASIC13.69□□□□□ -0.22
TRGV9Q99603 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV9Q99603 AC068472.1-201ENST00000474589 881 ntBASIC13.69□□□□□ -0.22
TRGV9Q99603 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV9Q99603 AL441883.1-201ENST00000566170 1045 ntBASIC13.69□□□□□ -0.22
TRGV9Q99603 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.69□□□□□ -0.22
TRGV9Q99603 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRGV9Q99603 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRGV9Q99603 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV9Q99603 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRGV9Q99603 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV9Q99603 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.69□□□□□ -0.22
TRGV9Q99603 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRGV9Q99603 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRGV9Q99603 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.68□□□□□ -0.22
TRGV9Q99603 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRGV9Q99603 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.68□□□□□ -0.22
TRGV9Q99603 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 AC097374.2-201ENST00000618617 1306 ntBASIC13.68□□□□□ -0.22
TRGV9Q99603 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.68□□□□□ -0.22
TRGV9Q99603 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.68□□□□□ -0.22
TRGV9Q99603 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRGV9Q99603 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 AC060834.1-201ENST00000443027 2032 ntBASIC13.68□□□□□ -0.22
TRGV9Q99603 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRGV9Q99603 SPDYE15P-201ENST00000424157 909 ntBASIC13.68□□□□□ -0.22
TRGV9Q99603 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.68□□□□□ -0.22
TRGV9Q99603 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TRGV9Q99603 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.68□□□□□ -0.22
TRGV9Q99603 GPR32P1-201ENST00000601788 811 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms