Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 API5-211ENST00000534695 560 ntTSL 5 BASIC28.69■■■□□ 2.18
IFT140Q96RY7 AL138828.2-201ENST00000615812 383 ntBASIC28.69■■■□□ 2.18
IFT140Q96RY7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
IFT140Q96RY7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
IFT140Q96RY7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
IFT140Q96RY7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
IFT140Q96RY7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
IFT140Q96RY7 AC126763.1-201ENST00000552015 2118 ntBASIC28.69■■■□□ 2.18
IFT140Q96RY7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
IFT140Q96RY7 AC138969.3-201ENST00000546612 1459 ntBASIC28.69■■■□□ 2.18
IFT140Q96RY7 AC138932.2-201ENST00000548268 1459 ntBASIC28.69■■■□□ 2.18
IFT140Q96RY7 AC126755.4-201ENST00000549796 1459 ntBASIC28.69■■■□□ 2.18
IFT140Q96RY7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
IFT140Q96RY7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
IFT140Q96RY7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
IFT140Q96RY7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
IFT140Q96RY7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
IFT140Q96RY7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
IFT140Q96RY7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC28.67■■■□□ 2.18
IFT140Q96RY7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
IFT140Q96RY7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC28.67■■■□□ 2.18
IFT140Q96RY7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC28.67■■■□□ 2.18
IFT140Q96RY7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
IFT140Q96RY7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
IFT140Q96RY7 AC027307.2-201ENST00000591252 911 ntBASIC28.66■■■□□ 2.18
IFT140Q96RY7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
IFT140Q96RY7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC28.65■■■□□ 2.18
IFT140Q96RY7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
IFT140Q96RY7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC28.65■■■□□ 2.18
IFT140Q96RY7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
IFT140Q96RY7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
IFT140Q96RY7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
IFT140Q96RY7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC28.65■■■□□ 2.18
IFT140Q96RY7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
IFT140Q96RY7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
IFT140Q96RY7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
IFT140Q96RY7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
IFT140Q96RY7 AC007967.4-201ENST00000614700 386 ntBASIC28.65■■■□□ 2.18
IFT140Q96RY7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
IFT140Q96RY7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
IFT140Q96RY7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
IFT140Q96RY7 AL096828.2-201ENST00000567259 1965 ntBASIC28.64■■■□□ 2.18
IFT140Q96RY7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
IFT140Q96RY7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC28.64■■■□□ 2.18
IFT140Q96RY7 AC046185.3-201ENST00000623228 1824 ntBASIC28.64■■■□□ 2.18
IFT140Q96RY7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
IFT140Q96RY7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
IFT140Q96RY7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
IFT140Q96RY7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms