Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC46A1Q96NT5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 AL390961.4-201ENST00000623958 2535 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 NEFHP1-201ENST00000412845 2629 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 COX5BP2-201ENST00000392354 334 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 AL645939.2-201ENST00000427340 991 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 CNN2P11-201ENST00000429351 262 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 HTR5BP-201ENST00000430851 1154 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 MKNK2P1-201ENST00000437526 628 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 PRSS29P-201ENST00000440800 595 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 AC006504.4-201ENST00000592118 1568 ntBASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
SLC46A1Q96NT5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 AC138028.4-201ENST00000564984 1845 ntBASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC46A1Q96NT5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 HCG4B-203ENST00000450128 991 ntBASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 AC108073.2-201ENST00000464002 357 ntBASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 IGHV3-65-201ENST00000523210 341 ntBASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 AP002472.1-201ENST00000577490 586 ntBASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 MIR4751-201ENST00000578027 74 ntBASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC46A1Q96NT5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms