Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 GMCL1P1-201ENST00000463439 1581 ntBASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 PMS2P7-201ENST00000506558 1336 ntBASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 MINOS1P3-201ENST00000457048 203 ntBASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 AC093909.1-201ENST00000504731 1122 ntBASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 BX842568.4-201ENST00000421222 227 ntBASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 AF186996.4-201ENST00000467186 377 ntBASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 AC104390.1-201ENST00000555663 520 ntBASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 AC106730.1-201ENST00000566722 1090 ntBASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPGRIP1Q96KN7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 KRT18P67-201ENST00000432816 1264 ntBASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 RNPS1P1-201ENST00000507437 918 ntBASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 AC148477.8-201ENST00000624298 468 ntBASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 AL121761.2-201ENST00000598007 1648 ntBASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RPGRIP1Q96KN7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPGRIP1Q96KN7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms