Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 AC046158.3-201ENST00000624947 2558 ntBASIC16.9■□□□□ 0.3
VPS33AQ96AX1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.89■□□□□ 0.3
VPS33AQ96AX1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 LYSMD4-203ENST00000378904 2122 ntBASIC16.89■□□□□ 0.29
VPS33AQ96AX1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS33AQ96AX1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS33AQ96AX1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 AC018695.7-201ENST00000624587 2492 ntBASIC16.87■□□□□ 0.29
VPS33AQ96AX1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms