Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 AL645728.2-201ENST00000641974 660 ntBASIC21.33■■□□□ 1.01
CNKSR1Q969H4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR1Q969H4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.33■■□□□ 1.01
CNKSR1Q969H4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNKSR1Q969H4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CNKSR1Q969H4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.33■■□□□ 1
CNKSR1Q969H4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.33■■□□□ 1
CNKSR1Q969H4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNKSR1Q969H4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNKSR1Q969H4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.32■■□□□ 1
CNKSR1Q969H4 TUBB3P1-201ENST00000405796 1332 ntBASIC21.32■■□□□ 1
CNKSR1Q969H4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.32■■□□□ 1
CNKSR1Q969H4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 TFAMP1-201ENST00000412727 736 ntBASIC21.32■■□□□ 1
CNKSR1Q969H4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.32■■□□□ 1
CNKSR1Q969H4 KRT18P32-201ENST00000424695 1287 ntBASIC21.32■■□□□ 1
CNKSR1Q969H4 AC002472.2-201ENST00000442739 958 ntBASIC21.32■■□□□ 1
CNKSR1Q969H4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.32■■□□□ 1
CNKSR1Q969H4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.32■■□□□ 1
CNKSR1Q969H4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.32■■□□□ 1
CNKSR1Q969H4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.32■■□□□ 1
CNKSR1Q969H4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.32■■□□□ 1
CNKSR1Q969H4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.32■■□□□ 1
CNKSR1Q969H4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNKSR1Q969H4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CNKSR1Q969H4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.31■■□□□ 1
CNKSR1Q969H4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.31■■□□□ 1
CNKSR1Q969H4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
CNKSR1Q969H4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CNKSR1Q969H4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.31■■□□□ 1
CNKSR1Q969H4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.31■■□□□ 1
CNKSR1Q969H4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CNKSR1Q969H4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.31■■□□□ 1
CNKSR1Q969H4 MIR943-201ENST00000401286 94 ntBASIC21.31■■□□□ 1
CNKSR1Q969H4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.31■■□□□ 1
CNKSR1Q969H4 TSPY16P-201ENST00000449843 468 ntBASIC21.31■■□□□ 1
CNKSR1Q969H4 AC087163.2-201ENST00000457299 853 ntBASIC21.31■■□□□ 1
CNKSR1Q969H4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.31■■□□□ 1
CNKSR1Q969H4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CNKSR1Q969H4 RN7SL204P-201ENST00000582831 262 ntBASIC21.31■■□□□ 1
CNKSR1Q969H4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CNKSR1Q969H4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.31■■□□□ 1
CNKSR1Q969H4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CNKSR1Q969H4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNKSR1Q969H4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.31■■□□□ 1
CNKSR1Q969H4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.3■■□□□ 1
CNKSR1Q969H4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNKSR1Q969H4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CNKSR1Q969H4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.3■■□□□ 1
CNKSR1Q969H4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.3■■□□□ 1
CNKSR1Q969H4 KLF2P3-201ENST00000451977 1087 ntBASIC21.3■■□□□ 1
CNKSR1Q969H4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.3■■□□□ 1
CNKSR1Q969H4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.3■■□□□ 1
CNKSR1Q969H4 AC005225.4-201ENST00000557330 545 ntBASIC21.3■■□□□ 1
CNKSR1Q969H4 AC243562.1-201ENST00000560672 389 ntBASIC21.3■■□□□ 1
CNKSR1Q969H4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.3■■□□□ 1
CNKSR1Q969H4 AC012645.4-201ENST00000610691 1061 ntBASIC21.3■■□□□ 1
CNKSR1Q969H4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.3■■□□□ 1
CNKSR1Q969H4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNKSR1Q969H4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.3■■□□□ 1
CNKSR1Q969H4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CNKSR1Q969H4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.29■■□□□ 1
CNKSR1Q969H4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR1Q969H4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms