Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.62■□□□□ 0.89
TRPM4Q8TD43 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPM4Q8TD43 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPM4Q8TD43 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRPM4Q8TD43 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 SPCS2P4-201ENST00000436160 681 ntBASIC20.61■□□□□ 0.89
TRPM4Q8TD43 FAM207CP-201ENST00000443486 507 ntBASIC20.61■□□□□ 0.89
TRPM4Q8TD43 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 DUX4L17-201ENST00000557360 1267 ntBASIC20.61■□□□□ 0.89
TRPM4Q8TD43 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.61■□□□□ 0.89
TRPM4Q8TD43 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 AC008677.1-201ENST00000519230 1561 ntBASIC20.6■□□□□ 0.89
TRPM4Q8TD43 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 AC073130.3-201ENST00000624389 2278 ntBASIC20.6■□□□□ 0.89
TRPM4Q8TD43 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.6■□□□□ 0.89
TRPM4Q8TD43 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 AC129492.6-201ENST00000611383 1305 ntBASIC20.59■□□□□ 0.89
TRPM4Q8TD43 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 AL135999.2-201ENST00000622438 1686 ntBASIC20.59■□□□□ 0.89
TRPM4Q8TD43 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 AC107918.2-201ENST00000530817 355 ntBASIC20.59■□□□□ 0.89
TRPM4Q8TD43 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 AC140878.1-201ENST00000565277 250 ntBASIC20.59■□□□□ 0.89
TRPM4Q8TD43 RARRES2P8-201ENST00000566335 367 ntBASIC20.59■□□□□ 0.89
TRPM4Q8TD43 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRPM4Q8TD43 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 AC093677.2-201ENST00000600169 1863 ntBASIC20.58■□□□□ 0.89
TRPM4Q8TD43 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 SPDYE14P-201ENST00000442619 822 ntBASIC20.58■□□□□ 0.89
TRPM4Q8TD43 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 IGHV3-42-201ENST00000520410 361 ntBASIC20.58■□□□□ 0.89
TRPM4Q8TD43 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.58■□□□□ 0.89
TRPM4Q8TD43 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.58■□□□□ 0.88
TRPM4Q8TD43 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRPM4Q8TD43 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRPM4Q8TD43 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.58■□□□□ 0.88
TRPM4Q8TD43 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRPM4Q8TD43 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.58■□□□□ 0.88
TRPM4Q8TD43 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms