Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC125634.1-201ENST00000438758 1403 ntBASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 AC233702.3-201ENST00000578656 1387 ntBASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 DRAXINP1-201ENST00000437611 948 ntBASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 LINC00265-3P-201ENST00000447588 903 ntBASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 KRT126P-201ENST00000549467 1181 ntBASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 AL138831.2-201ENST00000606564 490 ntBASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 LINC00304-203ENST00000565008 1864 ntBASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.56■□□□□ 0.24
SIMC1Q8NDZ2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 AC018695.7-201ENST00000624587 2492 ntBASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 ATP5G2P1-201ENST00000433580 426 ntBASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SIMC1Q8NDZ2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms