Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT4Q8N9R6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDRT4Q8N9R6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 NSUN5P1-202ENST00000421140 1535 ntBASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 NSUN5P2-203ENST00000457352 1529 ntBASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 AC104819.1-201ENST00000504587 486 ntBASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 AL049757.1-201ENST00000616842 1596 ntBASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT4Q8N9R6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 IGHV3-47-201ENST00000425060 335 ntBASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 AP000867.3-201ENST00000524675 377 ntBASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 AC074051.2-201ENST00000565115 352 ntBASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 AC012615.1-201ENST00000565797 1299 ntBASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 AC092329.2-201ENST00000598402 547 ntBASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
CDRT4Q8N9R6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 AC108860.2-201ENST00000562760 2183 ntBASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 POM121L3P-201ENST00000419331 1163 ntBASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 AC096582.2-201ENST00000510860 516 ntBASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 BNIP3P18-201ENST00000593976 575 ntBASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 AC092119.3-201ENST00000612618 583 ntBASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms