Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSMEM1Q8N8F7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 KRT8P26-201ENST00000534154 1276 ntBASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 AL592071.1-201ENST00000611956 408 ntBASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 AL121956.5-201ENST00000625261 221 ntBASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 AC125634.1-201ENST00000438758 1403 ntBASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 AP001094.4-201ENST00000579008 2176 ntBASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSMEM1Q8N8F7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM1Q8N8F7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.08■□□□□ 0.17
LSMEM1Q8N8F7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.08■□□□□ 0.17
LSMEM1Q8N8F7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM1Q8N8F7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM1Q8N8F7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.08■□□□□ 0.17
LSMEM1Q8N8F7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LSMEM1Q8N8F7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LSMEM1Q8N8F7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 AL031133.1-201ENST00000406807 723 ntBASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 AL139327.4-201ENST00000612362 153 ntBASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LSMEM1Q8N8F7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms