Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 FDX1P1-201ENST00000449115 551 ntBASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 AC122714.2-201ENST00000502787 707 ntBASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 AC073648.2-201ENST00000510116 352 ntBASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 AC106795.1-205ENST00000512851 1056 ntBASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 AC100803.2-201ENST00000562459 1963 ntBASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
TRIM48Q8IWZ4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 AP005117.1-201ENST00000584346 1413 ntBASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 ABALON-201ENST00000629058 1903 ntBASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 AC079776.4-201ENST00000511039 504 ntBASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM48Q8IWZ4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 AC103564.2-201ENST00000432853 1299 ntBASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 TP73-AS1-207ENST00000624167 988 ntBASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM48Q8IWZ4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms