Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 AL135999.2-201ENST00000622438 1686 ntBASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 WRB-204ENST00000398753 699 ntTSL 3 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 AC107890.1-201ENST00000422478 521 ntBASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 RBPMS2P1-201ENST00000437762 623 ntBASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 GAPDHP21-201ENST00000450301 1010 ntBASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 DUX4L17-201ENST00000557360 1267 ntBASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 LINC02560-201ENST00000596379 459 ntBASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT28Q7Z3Y7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 AC008761.3-201ENST00000624803 892 ntBASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT28Q7Z3Y7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 TREML5P-201ENST00000421694 576 ntBASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 SPCS2P4-201ENST00000436160 681 ntBASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 SLC25A39P2-201ENST00000537614 270 ntBASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 CROCCP3-202ENST00000420820 1947 ntBASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
KRT28Q7Z3Y7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 FAM207CP-201ENST00000443486 507 ntBASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 AC125807.1-201ENST00000483097 614 ntBASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 AC140878.1-201ENST00000565277 250 ntBASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 RARRES2P8-201ENST00000566335 367 ntBASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 AKAP8P1-201ENST00000434743 1349 ntBASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.52■■□□□ 1.36
KRT28Q7Z3Y7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.52■■□□□ 1.35
KRT28Q7Z3Y7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
KRT28Q7Z3Y7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms