Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AL390955.2-201ENST00000603032 514 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AC099522.2-201ENST00000607001 744 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 SPDYE10P-202ENST00000612005 668 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 SPDYE8P-202ENST00000612377 668 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 AC046185.3-201ENST00000623228 1824 ntBASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 PMS2P4-201ENST00000412466 1052 ntBASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 AC140658.5-201ENST00000438532 169 ntBASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 KRT8P48-201ENST00000515599 1220 ntBASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 AC069262.1-201ENST00000539058 672 ntBASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNKSR3Q6P9H4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 AC093214.1-201ENST00000511688 1107 ntBASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 DUX4L27-201ENST00000554796 1261 ntBASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 AL645728.2-201ENST00000641974 660 ntBASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CNKSR3Q6P9H4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 CNN2P2-201ENST00000443536 909 ntBASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 CNN2P3-201ENST00000450201 906 ntBASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 RN7SL589P-201ENST00000481268 310 ntBASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 AL136317.3-201ENST00000618497 906 ntBASIC18.71■□□□□ 0.59
CNKSR3Q6P9H4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms