Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 AC007967.3-201ENST00000434308 558 ntBASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 AC009533.2-201ENST00000543664 586 ntBASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 Z69720.1-201ENST00000601483 472 ntBASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST2H2AA3Q6FI13 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 MYCLP1-201ENST00000372451 1075 ntBASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 FAM220CP-201ENST00000395253 831 ntBASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 MIR1224-201ENST00000408193 85 ntBASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 AC103564.2-201ENST00000432853 1299 ntBASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 AC002558.1-201ENST00000488906 803 ntBASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 IGHV3-52-201ENST00000519770 353 ntBASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 AL138831.2-201ENST00000606564 490 ntBASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HIST2H2AA3Q6FI13 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 AL845331.1-201ENST00000424978 1190 ntBASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 AC122714.2-201ENST00000502787 707 ntBASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 AC010331.1-201ENST00000611423 582 ntBASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 AL358472.4-201ENST00000633140 710 ntBASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H2AA3Q6FI13 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms