Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 INTS4P1-201ENST00000438455 1935 ntBASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 AC004870.1-201ENST00000315132 882 ntBASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC39BQ5VTQ0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 AC122714.2-201ENST00000502787 707 ntBASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC39BQ5VTQ0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 RN7SL510P-201ENST00000581311 263 ntBASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 PKD1P1-201ENST00000458669 6805 ntBASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms