Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 KRT18P65-201ENST00000439811 1286 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 USP32P1-208ENST00000506594 1164 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 SPDYE18-201ENST00000510091 1050 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 DOC2GP-202ENST00000514950 1163 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AC020765.3-201ENST00000613051 740 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 HIST2H2BC-201ENST00000498492 580 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AL844908.2-201ENST00000609461 460 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AC140658.5-201ENST00000438532 169 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AC006033.1-201ENST00000440505 426 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AC092667.1-201ENST00000434301 2586 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 EIF4HP1-201ENST00000453115 687 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 AC010234.1-201ENST00000494599 870 ntBASIC9.45□□□□□ -0.9
UBR4Q5T4S7 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 RBM7-208ENST00000545678 867 ntTSL 3 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 TEX28P1-201ENST00000613479 1221 ntBASIC9.44□□□□□ -0.9
UBR4Q5T4S7 TEX28P2-201ENST00000617764 1221 ntBASIC9.44□□□□□ -0.9
UBR4Q5T4S7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 PWWP2AP1-201ENST00000429776 2273 ntBASIC9.44□□□□□ -0.9
UBR4Q5T4S7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 FO681548.1-201ENST00000455617 1132 ntBASIC9.44□□□□□ -0.9
UBR4Q5T4S7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC9.44□□□□□ -0.9
UBR4Q5T4S7 AC008267.1-201ENST00000474858 1069 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms