Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RPS4XP62701 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4XP62701 NUS1P1-201ENST00000446295 882 ntBASIC15.85■□□□□ 0.13
RPS4XP62701 FAAHP1-202ENST00000446499 1238 ntBASIC15.85■□□□□ 0.13
RPS4XP62701 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 RN7SL606P-201ENST00000472779 293 ntBASIC15.85■□□□□ 0.13
RPS4XP62701 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.85■□□□□ 0.13
RPS4XP62701 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.85■□□□□ 0.13
RPS4XP62701 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RPS4XP62701 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4XP62701 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.85■□□□□ 0.13
RPS4XP62701 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RPS4XP62701 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4XP62701 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 AC022211.2-201ENST00000585075 2527 ntBASIC15.85■□□□□ 0.13
RPS4XP62701 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4XP62701 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4XP62701 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.84■□□□□ 0.13
RPS4XP62701 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.84■□□□□ 0.13
RPS4XP62701 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RPS4XP62701 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.84■□□□□ 0.13
RPS4XP62701 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 AC116353.5-201ENST00000638148 1699 ntBASIC15.84■□□□□ 0.13
RPS4XP62701 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RPS4XP62701 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.84■□□□□ 0.13
RPS4XP62701 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.84■□□□□ 0.13
RPS4XP62701 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.84■□□□□ 0.13
RPS4XP62701 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.84■□□□□ 0.13
RPS4XP62701 PCDHA12-202ENST00000613593 2588 ntBASIC15.84■□□□□ 0.13
RPS4XP62701 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.84■□□□□ 0.13
RPS4XP62701 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RPS4XP62701 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RPS4XP62701 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPS4XP62701 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4XP62701 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.84■□□□□ 0.13
RPS4XP62701 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.83■□□□□ 0.13
RPS4XP62701 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
RPS4XP62701 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RPS4XP62701 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPS4XP62701 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.83■□□□□ 0.13
RPS4XP62701 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RPS4XP62701 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
RPS4XP62701 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
RPS4XP62701 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.83■□□□□ 0.12
RPS4XP62701 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
RPS4XP62701 LINC00265-3P-201ENST00000447588 903 ntBASIC15.83■□□□□ 0.12
RPS4XP62701 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 LINC01711-201ENST00000598340 967 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms