Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.42■□□□□ 0.06
SEC61A1P61619 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.42■□□□□ 0.06
SEC61A1P61619 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.42■□□□□ 0.06
SEC61A1P61619 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 KRT18P41-201ENST00000518924 1277 ntBASIC15.42■□□□□ 0.06
SEC61A1P61619 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.42■□□□□ 0.06
SEC61A1P61619 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.42■□□□□ 0.06
SEC61A1P61619 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.42■□□□□ 0.06
SEC61A1P61619 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SEC61A1P61619 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.42■□□□□ 0.06
SEC61A1P61619 MIR3917-201ENST00000580971 93 ntBASIC15.42■□□□□ 0.06
SEC61A1P61619 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.42■□□□□ 0.06
SEC61A1P61619 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.42■□□□□ 0.06
SEC61A1P61619 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.42■□□□□ 0.06
SEC61A1P61619 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SEC61A1P61619 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SEC61A1P61619 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.42■□□□□ 0.06
SEC61A1P61619 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.42■□□□□ 0.06
SEC61A1P61619 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 HOXB1-202ENST00000577092 1414 ntBASIC15.42■□□□□ 0.06
SEC61A1P61619 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SEC61A1P61619 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SEC61A1P61619 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
SEC61A1P61619 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 AC099343.3-201ENST00000605834 2503 ntBASIC15.41■□□□□ 0.06
SEC61A1P61619 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.41■□□□□ 0.06
SEC61A1P61619 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.41■□□□□ 0.06
SEC61A1P61619 AL136038.3-201ENST00000561909 1096 ntBASIC15.41■□□□□ 0.06
SEC61A1P61619 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.41■□□□□ 0.06
SEC61A1P61619 AC010240.3-201ENST00000607688 395 ntBASIC15.41■□□□□ 0.06
SEC61A1P61619 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SEC61A1P61619 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 PCDHB19P-201ENST00000570871 2371 ntBASIC15.41■□□□□ 0.06
SEC61A1P61619 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SEC61A1P61619 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SEC61A1P61619 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SEC61A1P61619 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.41■□□□□ 0.06
SEC61A1P61619 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.4■□□□□ 0.06
SEC61A1P61619 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SEC61A1P61619 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
SEC61A1P61619 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SEC61A1P61619 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.4■□□□□ 0.06
SEC61A1P61619 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms