Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 RBM7-207ENST00000544582 692 ntTSL 3 BASIC23.28■■□□□ 1.32
ZC3H6P61129 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.28■■□□□ 1.32
ZC3H6P61129 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC23.28■■□□□ 1.32
ZC3H6P61129 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.28■■□□□ 1.32
ZC3H6P61129 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
ZC3H6P61129 AL020996.1-203ENST00000536896 2307 ntBASIC23.27■■□□□ 1.32
ZC3H6P61129 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H6P61129 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H6P61129 AC005034.1-201ENST00000426657 489 ntBASIC23.27■■□□□ 1.32
ZC3H6P61129 FAM58DP-201ENST00000428076 619 ntBASIC23.27■■□□□ 1.32
ZC3H6P61129 GSAP-205ENST00000430584 600 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H6P61129 AC067863.1-201ENST00000494933 530 ntBASIC23.27■■□□□ 1.32
ZC3H6P61129 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC23.27■■□□□ 1.32
ZC3H6P61129 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H6P61129 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H6P61129 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H6P61129 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H6P61129 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H6P61129 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H6P61129 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
ZC3H6P61129 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.26■■□□□ 1.31
ZC3H6P61129 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
ZC3H6P61129 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 MYCLP1-201ENST00000372451 1075 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 AC236430.1-201ENST00000402231 743 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
ZC3H6P61129 AC055876.3-201ENST00000431496 288 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 SPDYE11-202ENST00000450699 704 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC23.26■■□□□ 1.31
ZC3H6P61129 SPDYE9P-201ENST00000570642 692 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 SPDYE10P-202ENST00000612005 668 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 AC138649.4-201ENST00000612222 287 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 SPDYE8P-202ENST00000612377 668 ntBASIC23.26■■□□□ 1.31
ZC3H6P61129 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC23.26■■□□□ 1.31
ZC3H6P61129 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.26■■□□□ 1.31
ZC3H6P61129 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.26■■□□□ 1.31
ZC3H6P61129 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H6P61129 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H6P61129 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC23.25■■□□□ 1.31
ZC3H6P61129 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 MIR661-201ENST00000384842 89 ntBASIC23.25■■□□□ 1.31
ZC3H6P61129 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.25■■□□□ 1.31
ZC3H6P61129 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H6P61129 AL592309.1-201ENST00000443127 649 ntBASIC23.25■■□□□ 1.31
ZC3H6P61129 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC23.25■■□□□ 1.31
ZC3H6P61129 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC23.25■■□□□ 1.31
ZC3H6P61129 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H6P61129 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H6P61129 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H6P61129 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.25■■□□□ 1.31
ZC3H6P61129 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC23.25■■□□□ 1.31
ZC3H6P61129 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H6P61129 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
ZC3H6P61129 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.24■■□□□ 1.31
ZC3H6P61129 AP000997.3-201ENST00000623333 2250 ntBASIC23.24■■□□□ 1.31
ZC3H6P61129 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC23.24■■□□□ 1.31
ZC3H6P61129 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
ZC3H6P61129 COPE-202ENST00000349893 948 ntTSL 2 BASIC23.24■■□□□ 1.31
ZC3H6P61129 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 AC079140.1-201ENST00000508039 487 ntBASIC23.24■■□□□ 1.31
ZC3H6P61129 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 PUDP-206ENST00000540122 825 ntTSL 2 BASIC23.24■■□□□ 1.31
ZC3H6P61129 AC051619.7-201ENST00000568314 623 ntBASIC23.24■■□□□ 1.31
ZC3H6P61129 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.24■■□□□ 1.31
ZC3H6P61129 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.24■■□□□ 1.31
ZC3H6P61129 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H6P61129 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC23.23■■□□□ 1.31
ZC3H6P61129 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.23■■□□□ 1.31
ZC3H6P61129 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
ZC3H6P61129 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms