Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.08■□□□□ 0.16
CDC42P60953 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 LYSMD4-203ENST00000378904 2122 ntBASIC16.07■□□□□ 0.16
CDC42P60953 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC42P60953 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDC42P60953 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.07■□□□□ 0.16
CDC42P60953 CCR12P-201ENST00000446203 998 ntBASIC16.07■□□□□ 0.16
CDC42P60953 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC42P60953 BX088651.1-201ENST00000540551 451 ntBASIC16.07■□□□□ 0.16
CDC42P60953 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.07■□□□□ 0.16
CDC42P60953 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC42P60953 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDC42P60953 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC42P60953 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC42P60953 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC42P60953 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC42P60953 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC42P60953 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC42P60953 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CDC42P60953 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC42P60953 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC42P60953 AC046158.3-201ENST00000624947 2558 ntBASIC16.06■□□□□ 0.16
CDC42P60953 FLJ38576-201ENST00000623820 2459 ntBASIC16.06■□□□□ 0.16
CDC42P60953 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC42P60953 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDC42P60953 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.06■□□□□ 0.16
CDC42P60953 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC42P60953 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC42P60953 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.06■□□□□ 0.16
CDC42P60953 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.06■□□□□ 0.16
CDC42P60953 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDC42P60953 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC42P60953 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.06■□□□□ 0.16
CDC42P60953 REXO1L10P-201ENST00000615707 1290 ntBASIC16.06■□□□□ 0.16
CDC42P60953 REXO1L12P-201ENST00000622156 912 ntBASIC16.06■□□□□ 0.16
CDC42P60953 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.06■□□□□ 0.16
CDC42P60953 AL139384.1-201ENST00000612143 3047 ntBASIC16.06■□□□□ 0.16
CDC42P60953 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.06■□□□□ 0.16
CDC42P60953 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC42P60953 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC42P60953 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDC42P60953 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC42P60953 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDC42P60953 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 AC116353.5-201ENST00000638148 1699 ntBASIC16.05■□□□□ 0.16
CDC42P60953 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC42P60953 PCDH8P1-201ENST00000428983 2773 ntBASIC16.05■□□□□ 0.16
CDC42P60953 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDC42P60953 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC42P60953 AL603756.1-201ENST00000606511 2163 ntBASIC16.05■□□□□ 0.16
CDC42P60953 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
CDC42P60953 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.05■□□□□ 0.16
CDC42P60953 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.05■□□□□ 0.16
CDC42P60953 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.05■□□□□ 0.16
CDC42P60953 FAM201B-201ENST00000458407 597 ntBASIC16.05■□□□□ 0.16
CDC42P60953 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC42P60953 AC005915.1-201ENST00000624912 2018 ntBASIC16.05■□□□□ 0.16
CDC42P60953 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.05■□□□□ 0.16
CDC42P60953 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDC42P60953 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC42P60953 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.05■□□□□ 0.16
CDC42P60953 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CDC42P60953 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms