Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP1S2P56377 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 CROCCP2-202ENST00000412962 2773 ntBASIC17.1■□□□□ 0.33
AP1S2P56377 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 IGHV3-47-201ENST00000425060 335 ntBASIC17.1■□□□□ 0.33
AP1S2P56377 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S2P56377 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S2P56377 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.1■□□□□ 0.33
AP1S2P56377 AC012615.1-201ENST00000565797 1299 ntBASIC17.1■□□□□ 0.33
AP1S2P56377 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.1■□□□□ 0.33
AP1S2P56377 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S2P56377 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S2P56377 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 TP73-AS1-210ENST00000637775 1455 ntBASIC17.1■□□□□ 0.33
AP1S2P56377 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP1S2P56377 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S2P56377 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
AP1S2P56377 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP1S2P56377 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.09■□□□□ 0.33
AP1S2P56377 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
AP1S2P56377 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S2P56377 AC104819.1-201ENST00000504587 486 ntBASIC17.09■□□□□ 0.33
AP1S2P56377 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S2P56377 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.09■□□□□ 0.33
AP1S2P56377 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AP1S2P56377 AC092329.2-201ENST00000598402 547 ntBASIC17.09■□□□□ 0.33
AP1S2P56377 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP1S2P56377 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AP1S2P56377 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S2P56377 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S2P56377 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S2P56377 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
AP1S2P56377 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AP1S2P56377 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.08■□□□□ 0.33
AP1S2P56377 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S2P56377 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
AP1S2P56377 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
AP1S2P56377 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
AP1S2P56377 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.08■□□□□ 0.32
AP1S2P56377 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 AL353593.2-201ENST00000602529 1483 ntBASIC17.08■□□□□ 0.32
AP1S2P56377 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
AP1S2P56377 POM121L3P-201ENST00000419331 1163 ntBASIC17.08■□□□□ 0.32
AP1S2P56377 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
AP1S2P56377 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S2P56377 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S2P56377 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.08■□□□□ 0.32
AP1S2P56377 AC074051.2-201ENST00000565115 352 ntBASIC17.08■□□□□ 0.32
AP1S2P56377 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S2P56377 BNIP3P18-201ENST00000593976 575 ntBASIC17.08■□□□□ 0.32
AP1S2P56377 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.08■□□□□ 0.32
AP1S2P56377 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
AP1S2P56377 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.08■□□□□ 0.32
AP1S2P56377 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
AP1S2P56377 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S2P56377 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.08■□□□□ 0.32
AP1S2P56377 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
AP1S2P56377 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
AP1S2P56377 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S2P56377 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S2P56377 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms