Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 HCG11-201ENST00000411553 5696 ntBASIC18.73■□□□□ 0.59
CDH8P55286 LYSMD4-203ENST00000378904 2122 ntBASIC18.73■□□□□ 0.59
CDH8P55286 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH8P55286 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH8P55286 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH8P55286 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH8P55286 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDH8P55286 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH8P55286 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH8P55286 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CDH8P55286 SART3-203ENST00000546611 1184 ntBASIC18.72■□□□□ 0.59
CDH8P55286 NKAPP1-205ENST00000585790 367 ntBASIC18.72■□□□□ 0.59
CDH8P55286 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH8P55286 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH8P55286 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
CDH8P55286 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH8P55286 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH8P55286 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CDH8P55286 AC079776.2-201ENST00000641154 1609 ntBASIC18.71■□□□□ 0.59
CDH8P55286 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH8P55286 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH8P55286 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CDH8P55286 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH8P55286 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDH8P55286 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH8P55286 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH8P55286 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH8P55286 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDH8P55286 BX005266.1-201ENST00000473402 457 ntBASIC18.71■□□□□ 0.59
CDH8P55286 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
CDH8P55286 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.71■□□□□ 0.59
CDH8P55286 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH8P55286 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH8P55286 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDH8P55286 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 PP12613-201ENST00000424958 2230 ntBASIC18.71■□□□□ 0.59
CDH8P55286 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDH8P55286 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH8P55286 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CDH8P55286 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDH8P55286 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH8P55286 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDH8P55286 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDH8P55286 AL356309.3-201ENST00000624132 1934 ntBASIC18.7■□□□□ 0.58
CDH8P55286 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH8P55286 KLF4P1-201ENST00000412782 1185 ntBASIC18.7■□□□□ 0.58
CDH8P55286 SPDYE21P-201ENST00000413323 827 ntBASIC18.7■□□□□ 0.58
CDH8P55286 FAAHP1-202ENST00000446499 1238 ntBASIC18.7■□□□□ 0.58
CDH8P55286 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH8P55286 STK19B-204ENST00000512515 211 ntBASIC18.7■□□□□ 0.58
CDH8P55286 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH8P55286 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH8P55286 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH8P55286 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH8P55286 AL139327.4-201ENST00000612362 153 ntBASIC18.7■□□□□ 0.58
CDH8P55286 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH8P55286 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH8P55286 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH8P55286 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH8P55286 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH8P55286 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDH8P55286 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH8P55286 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms