Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDX1P52945 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PDX1P52945 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.05■□□□□ 0.32
PDX1P52945 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDX1P52945 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.04■□□□□ 0.32
PDX1P52945 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDX1P52945 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.04■□□□□ 0.32
PDX1P52945 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDX1P52945 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDX1P52945 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 AC096633.1-201ENST00000422446 749 ntBASIC17.04■□□□□ 0.32
PDX1P52945 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 AC040169.1-201ENST00000565382 521 ntBASIC17.04■□□□□ 0.32
PDX1P52945 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.04■□□□□ 0.32
PDX1P52945 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PDX1P52945 REXO1L9P-201ENST00000604264 2108 ntBASIC17.04■□□□□ 0.32
PDX1P52945 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 AD001527.2-201ENST00000622994 785 ntBASIC17.04■□□□□ 0.32
PDX1P52945 AL022326.1-202ENST00000641533 845 ntBASIC17.04■□□□□ 0.32
PDX1P52945 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDX1P52945 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
PDX1P52945 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PDX1P52945 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 AC004817.3-201ENST00000602957 2129 ntBASIC17.03■□□□□ 0.32
PDX1P52945 KRT8P47-201ENST00000604727 1398 ntBASIC17.03■□□□□ 0.32
PDX1P52945 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.03■□□□□ 0.32
PDX1P52945 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.03■□□□□ 0.32
PDX1P52945 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.03■□□□□ 0.32
PDX1P52945 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PDX1P52945 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.03■□□□□ 0.32
PDX1P52945 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.03■□□□□ 0.32
PDX1P52945 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.03■□□□□ 0.32
PDX1P52945 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.03■□□□□ 0.32
PDX1P52945 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.03■□□□□ 0.32
PDX1P52945 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PDX1P52945 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PDX1P52945 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDX1P52945 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.03■□□□□ 0.32
PDX1P52945 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.02■□□□□ 0.32
PDX1P52945 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.02■□□□□ 0.32
PDX1P52945 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PDX1P52945 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.02■□□□□ 0.32
PDX1P52945 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
PDX1P52945 NOC2LP2-201ENST00000407594 1944 ntBASIC17.02■□□□□ 0.32
PDX1P52945 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms