Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.48■□□□□ 0.23
SMSP52788 AC079776.4-201ENST00000511039 504 ntBASIC16.48■□□□□ 0.23
SMSP52788 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.48■□□□□ 0.23
SMSP52788 AC005332.3-201ENST00000589904 676 ntBASIC16.48■□□□□ 0.23
SMSP52788 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.48■□□□□ 0.23
SMSP52788 AC104692.2-201ENST00000603054 253 ntBASIC16.48■□□□□ 0.23
SMSP52788 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SMSP52788 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.48■□□□□ 0.23
SMSP52788 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.48■□□□□ 0.23
SMSP52788 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SMSP52788 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.48■□□□□ 0.23
SMSP52788 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SMSP52788 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.48■□□□□ 0.23
SMSP52788 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.48■□□□□ 0.23
SMSP52788 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMSP52788 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SMSP52788 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SMSP52788 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMSP52788 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
SMSP52788 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 HOXB1-202ENST00000577092 1414 ntBASIC16.47■□□□□ 0.23
SMSP52788 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.47■□□□□ 0.23
SMSP52788 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SMSP52788 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SMSP52788 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.47■□□□□ 0.23
SMSP52788 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.47■□□□□ 0.23
SMSP52788 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.47■□□□□ 0.23
SMSP52788 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.47■□□□□ 0.23
SMSP52788 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.47■□□□□ 0.23
SMSP52788 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.47■□□□□ 0.23
SMSP52788 AC138894.3-201ENST00000603787 634 ntBASIC16.47■□□□□ 0.23
SMSP52788 AC023511.2-201ENST00000618803 211 ntBASIC16.47■□□□□ 0.23
SMSP52788 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SMSP52788 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.47■□□□□ 0.23
SMSP52788 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SMSP52788 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 OR6D1P-203ENST00000641209 4860 ntBASIC16.47■□□□□ 0.23
SMSP52788 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMSP52788 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMSP52788 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SMSP52788 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.46■□□□□ 0.23
SMSP52788 AC079781.3-201ENST00000449110 356 ntBASIC16.46■□□□□ 0.23
SMSP52788 GUSBP12-201ENST00000513727 720 ntBASIC16.46■□□□□ 0.23
SMSP52788 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.46■□□□□ 0.23
SMSP52788 AC009065.1-201ENST00000564055 1225 ntBASIC16.46■□□□□ 0.23
SMSP52788 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.46■□□□□ 0.23
SMSP52788 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 AL121912.1-201ENST00000603683 238 ntBASIC16.46■□□□□ 0.23
SMSP52788 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SMSP52788 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.46■□□□□ 0.23
SMSP52788 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
SMSP52788 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SMSP52788 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SMSP52788 TNRC18P3-201ENST00000441896 2691 ntBASIC16.46■□□□□ 0.23
SMSP52788 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMSP52788 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SMSP52788 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms