Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC30.61■■■□□ 2.49
NCAPD3P42695 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC30.61■■■□□ 2.49
NCAPD3P42695 MIR4453-201ENST00000584019 89 ntBASIC30.61■■■□□ 2.49
NCAPD3P42695 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC30.61■■■□□ 2.49
NCAPD3P42695 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC30.61■■■□□ 2.49
NCAPD3P42695 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
NCAPD3P42695 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.61■■■□□ 2.49
NCAPD3P42695 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
NCAPD3P42695 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC30.61■■■□□ 2.49
NCAPD3P42695 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC30.6■■■□□ 2.49
NCAPD3P42695 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
NCAPD3P42695 PCDHAC2-203ENST00000615316 3011 ntBASIC30.6■■■□□ 2.49
NCAPD3P42695 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NCAPD3P42695 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC30.6■■■□□ 2.49
NCAPD3P42695 AC005412.3-201ENST00000580309 715 ntBASIC30.6■■■□□ 2.49
NCAPD3P42695 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC30.6■■■□□ 2.49
NCAPD3P42695 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC30.6■■■□□ 2.49
NCAPD3P42695 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
NCAPD3P42695 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NCAPD3P42695 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC30.6■■■□□ 2.49
NCAPD3P42695 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NCAPD3P42695 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC30.59■■■□□ 2.49
NCAPD3P42695 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
NCAPD3P42695 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC30.59■■■□□ 2.49
NCAPD3P42695 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
NCAPD3P42695 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
NCAPD3P42695 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC30.59■■■□□ 2.49
NCAPD3P42695 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
NCAPD3P42695 AC004233.3-201ENST00000607794 1269 ntBASIC30.59■■■□□ 2.49
NCAPD3P42695 AMT-250ENST00000637682 1823 ntTSL 5 BASIC30.59■■■□□ 2.49
NCAPD3P42695 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC30.59■■■□□ 2.49
NCAPD3P42695 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC30.59■■■□□ 2.49
NCAPD3P42695 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC30.59■■■□□ 2.49
NCAPD3P42695 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC30.58■■■□□ 2.49
NCAPD3P42695 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NCAPD3P42695 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NCAPD3P42695 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC30.58■■■□□ 2.49
NCAPD3P42695 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
NCAPD3P42695 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NCAPD3P42695 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC30.58■■■□□ 2.49
NCAPD3P42695 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC30.58■■■□□ 2.49
NCAPD3P42695 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC30.58■■■□□ 2.49
NCAPD3P42695 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NCAPD3P42695 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC30.58■■■□□ 2.49
NCAPD3P42695 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
NCAPD3P42695 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NCAPD3P42695 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
NCAPD3P42695 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC30.57■■■□□ 2.48
NCAPD3P42695 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC30.57■■■□□ 2.48
NCAPD3P42695 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC30.57■■■□□ 2.48
NCAPD3P42695 REEP4-207ENST00000523293 913 ntTSL 3 BASIC30.57■■■□□ 2.48
NCAPD3P42695 API5-211ENST00000534695 560 ntTSL 5 BASIC30.57■■■□□ 2.48
NCAPD3P42695 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC30.57■■■□□ 2.48
NCAPD3P42695 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
NCAPD3P42695 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
NCAPD3P42695 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC30.57■■■□□ 2.48
NCAPD3P42695 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NCAPD3P42695 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC30.57■■■□□ 2.48
NCAPD3P42695 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC30.57■■■□□ 2.48
NCAPD3P42695 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC30.57■■■□□ 2.48
NCAPD3P42695 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
NCAPD3P42695 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC30.56■■■□□ 2.48
NCAPD3P42695 AC046185.3-201ENST00000623228 1824 ntBASIC30.56■■■□□ 2.48
NCAPD3P42695 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
NCAPD3P42695 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NCAPD3P42695 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NCAPD3P42695 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NCAPD3P42695 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
NCAPD3P42695 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NCAPD3P42695 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC30.56■■■□□ 2.48
NCAPD3P42695 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
NCAPD3P42695 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC30.56■■■□□ 2.48
NCAPD3P42695 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NCAPD3P42695 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC30.56■■■□□ 2.48
NCAPD3P42695 PGF-202ENST00000405431 666 ntTSL 5 BASIC30.56■■■□□ 2.48
NCAPD3P42695 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC30.56■■■□□ 2.48
NCAPD3P42695 MIR3909-201ENST00000579518 119 ntBASIC30.56■■■□□ 2.48
NCAPD3P42695 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC30.56■■■□□ 2.48
NCAPD3P42695 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
NCAPD3P42695 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
NCAPD3P42695 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NCAPD3P42695 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
NCAPD3P42695 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC30.55■■■□□ 2.48
NCAPD3P42695 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NCAPD3P42695 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms