Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.79■□□□□ 0.44
HADHAP40939 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HADHAP40939 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HADHAP40939 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.79■□□□□ 0.44
HADHAP40939 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.79■□□□□ 0.44
HADHAP40939 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HADHAP40939 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HADHAP40939 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.78■□□□□ 0.44
HADHAP40939 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.78■□□□□ 0.44
HADHAP40939 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 BX276092.7-203ENST00000637198 1536 ntBASIC17.78■□□□□ 0.44
HADHAP40939 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.78■□□□□ 0.44
HADHAP40939 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.78■□□□□ 0.44
HADHAP40939 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HADHAP40939 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HADHAP40939 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.78■□□□□ 0.44
HADHAP40939 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.78■□□□□ 0.44
HADHAP40939 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.78■□□□□ 0.44
HADHAP40939 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HADHAP40939 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HADHAP40939 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.77■□□□□ 0.44
HADHAP40939 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.77■□□□□ 0.44
HADHAP40939 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HADHAP40939 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HADHAP40939 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.77■□□□□ 0.44
HADHAP40939 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.77■□□□□ 0.44
HADHAP40939 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.77■□□□□ 0.44
HADHAP40939 AC069148.1-201ENST00000608741 768 ntBASIC17.77■□□□□ 0.44
HADHAP40939 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.77■□□□□ 0.44
HADHAP40939 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.77■□□□□ 0.44
HADHAP40939 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HADHAP40939 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
HADHAP40939 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HADHAP40939 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HADHAP40939 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HADHAP40939 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HADHAP40939 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HADHAP40939 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.77■□□□□ 0.43
HADHAP40939 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HADHAP40939 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.77■□□□□ 0.43
HADHAP40939 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HADHAP40939 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 KRT18P1-202ENST00000452408 1331 ntBASIC17.76■□□□□ 0.43
HADHAP40939 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.76■□□□□ 0.43
HADHAP40939 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.76■□□□□ 0.43
HADHAP40939 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HADHAP40939 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
HADHAP40939 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HADHAP40939 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.76■□□□□ 0.43
HADHAP40939 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.76■□□□□ 0.43
HADHAP40939 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.76■□□□□ 0.43
HADHAP40939 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.76■□□□□ 0.43
HADHAP40939 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.76■□□□□ 0.43
HADHAP40939 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.76■□□□□ 0.43
HADHAP40939 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.76■□□□□ 0.43
HADHAP40939 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.76■□□□□ 0.43
HADHAP40939 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HADHAP40939 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.75■□□□□ 0.43
HADHAP40939 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms