Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AC046185.3-201ENST00000623228 1824 ntBASIC21.15■□□□□ 0.98
CHMLP26374 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.15■□□□□ 0.98
CHMLP26374 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHMLP26374 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 RCN1P2-201ENST00000398357 915 ntBASIC21.15■□□□□ 0.98
CHMLP26374 ATP5G2P1-201ENST00000433580 426 ntBASIC21.15■□□□□ 0.98
CHMLP26374 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.15■□□□□ 0.98
CHMLP26374 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMLP26374 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.15■□□□□ 0.98
CHMLP26374 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMLP26374 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHMLP26374 AC132938.5-201ENST00000624980 1813 ntBASIC21.15■□□□□ 0.98
CHMLP26374 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMLP26374 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 AC009053.2-201ENST00000563701 2365 ntBASIC21.15■□□□□ 0.98
CHMLP26374 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMLP26374 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMLP26374 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMLP26374 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CHMLP26374 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHMLP26374 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMLP26374 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMLP26374 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHMLP26374 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMLP26374 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CHMLP26374 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.14■□□□□ 0.98
CHMLP26374 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CHMLP26374 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMLP26374 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CHMLP26374 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMLP26374 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CHMLP26374 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.14■□□□□ 0.97
CHMLP26374 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.14■□□□□ 0.97
CHMLP26374 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.14■□□□□ 0.97
CHMLP26374 AC092119.3-201ENST00000612618 583 ntBASIC21.14■□□□□ 0.97
CHMLP26374 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMLP26374 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CHMLP26374 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMLP26374 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.14■□□□□ 0.97
CHMLP26374 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMLP26374 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMLP26374 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMLP26374 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CHMLP26374 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMLP26374 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
CHMLP26374 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMLP26374 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CHMLP26374 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CHMLP26374 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 MINOS1P3-201ENST00000457048 203 ntBASIC21.13■□□□□ 0.97
CHMLP26374 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.13■□□□□ 0.97
CHMLP26374 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.13■□□□□ 0.97
CHMLP26374 AC074051.2-201ENST00000565115 352 ntBASIC21.13■□□□□ 0.97
CHMLP26374 AC111152.3-201ENST00000569699 673 ntBASIC21.13■□□□□ 0.97
CHMLP26374 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.13■□□□□ 0.97
CHMLP26374 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMLP26374 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHMLP26374 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CHMLP26374 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms