Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
APCP25054 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
APCP25054 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.58□□□□□ -0.07
APCP25054 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.58□□□□□ -0.08
APCP25054 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.58□□□□□ -0.08
APCP25054 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.58□□□□□ -0.08
APCP25054 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.58□□□□□ -0.08
APCP25054 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.58□□□□□ -0.08
APCP25054 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.58□□□□□ -0.08
APCP25054 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
APCP25054 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
APCP25054 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.58□□□□□ -0.08
APCP25054 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APCP25054 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.58□□□□□ -0.08
APCP25054 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.58□□□□□ -0.08
APCP25054 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.58□□□□□ -0.08
APCP25054 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.58□□□□□ -0.08
APCP25054 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.58□□□□□ -0.08
APCP25054 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.58□□□□□ -0.08
APCP25054 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.58□□□□□ -0.08
APCP25054 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.58□□□□□ -0.08
APCP25054 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
APCP25054 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
APCP25054 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.58□□□□□ -0.08
APCP25054 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APCP25054 AC093677.2-201ENST00000600169 1863 ntBASIC14.57□□□□□ -0.08
APCP25054 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.57□□□□□ -0.08
APCP25054 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.57□□□□□ -0.08
APCP25054 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
APCP25054 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.57□□□□□ -0.08
APCP25054 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 MIR6080-201ENST00000617359 66 ntBASIC14.57□□□□□ -0.08
APCP25054 COX11-210ENST00000639671 696 ntBASIC14.57□□□□□ -0.08
APCP25054 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.57□□□□□ -0.08
APCP25054 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.57□□□□□ -0.08
APCP25054 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.57□□□□□ -0.08
APCP25054 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.57□□□□□ -0.08
APCP25054 AL133338.1-201ENST00000565695 1517 ntBASIC14.57□□□□□ -0.08
APCP25054 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
APCP25054 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.57□□□□□ -0.08
APCP25054 API5-211ENST00000534695 560 ntTSL 5 BASIC14.57□□□□□ -0.08
APCP25054 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.57□□□□□ -0.08
APCP25054 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APCP25054 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.57□□□□□ -0.08
APCP25054 AC093010.1-201ENST00000473625 1624 ntBASIC14.56□□□□□ -0.08
APCP25054 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
APCP25054 MIR346-201ENST00000362234 95 ntBASIC14.56□□□□□ -0.08
APCP25054 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
APCP25054 AC112492.5-201ENST00000421897 457 ntBASIC14.56□□□□□ -0.08
APCP25054 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.56□□□□□ -0.08
APCP25054 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.56□□□□□ -0.08
APCP25054 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
APCP25054 AC104794.3-201ENST00000566840 1248 ntBASIC14.56□□□□□ -0.08
APCP25054 AC099568.2-201ENST00000609194 695 ntBASIC14.56□□□□□ -0.08
APCP25054 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
APCP25054 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
APCP25054 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.56□□□□□ -0.08
APCP25054 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.56□□□□□ -0.08
APCP25054 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.56□□□□□ -0.08
APCP25054 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
APCP25054 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
APCP25054 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.56□□□□□ -0.08
APCP25054 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.56□□□□□ -0.08
APCP25054 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.56□□□□□ -0.08
APCP25054 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.56□□□□□ -0.08
APCP25054 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.56□□□□□ -0.08
APCP25054 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
APCP25054 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.56□□□□□ -0.08
APCP25054 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
APCP25054 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APCP25054 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms