Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.14■□□□□ 0.65
RFX1P22670 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX1P22670 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.14■□□□□ 0.65
RFX1P22670 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX1P22670 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX1P22670 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX1P22670 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX1P22670 HTR7P1-202ENST00000624664 4411 ntBASIC19.14■□□□□ 0.65
RFX1P22670 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX1P22670 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RFX1P22670 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RFX1P22670 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
RFX1P22670 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX1P22670 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX1P22670 AC096633.1-201ENST00000422446 749 ntBASIC19.13■□□□□ 0.65
RFX1P22670 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX1P22670 AP001005.1-201ENST00000571755 1248 ntBASIC19.13■□□□□ 0.65
RFX1P22670 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RFX1P22670 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX1P22670 AF228730.7-201ENST00000641842 219 ntBASIC19.13■□□□□ 0.65
RFX1P22670 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RFX1P22670 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 AL645608.8-201ENST00000606034 2086 ntBASIC19.13■□□□□ 0.65
RFX1P22670 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RFX1P22670 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX1P22670 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RFX1P22670 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RFX1P22670 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RFX1P22670 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.12■□□□□ 0.65
RFX1P22670 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 SAPCD2P3-201ENST00000455031 850 ntBASIC19.12■□□□□ 0.65
RFX1P22670 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.12■□□□□ 0.65
RFX1P22670 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.12■□□□□ 0.65
RFX1P22670 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.12■□□□□ 0.65
RFX1P22670 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.12■□□□□ 0.65
RFX1P22670 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.12■□□□□ 0.65
RFX1P22670 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RFX1P22670 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RFX1P22670 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX1P22670 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX1P22670 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX1P22670 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RFX1P22670 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX1P22670 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RFX1P22670 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 AC097374.2-201ENST00000618617 1306 ntBASIC19.11■□□□□ 0.65
RFX1P22670 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RFX1P22670 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX1P22670 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX1P22670 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RFX1P22670 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX1P22670 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 NUS1P2-201ENST00000417358 873 ntBASIC19.11■□□□□ 0.65
RFX1P22670 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.11■□□□□ 0.65
RFX1P22670 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX1P22670 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RFX1P22670 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX1P22670 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX1P22670 PP12613-201ENST00000424958 2230 ntBASIC19.1■□□□□ 0.65
RFX1P22670 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
RFX1P22670 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 AC139713.2-201ENST00000641328 2723 ntBASIC19.1■□□□□ 0.65
RFX1P22670 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RFX1P22670 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RFX1P22670 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.1■□□□□ 0.65
RFX1P22670 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms