Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B1P20020 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B1P20020 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B1P20020 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
ATP2B1P20020 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B1P20020 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATP2B1P20020 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2B1P20020 AC005336.2-201ENST00000593183 939 ntBASIC20.24■□□□□ 0.83
ATP2B1P20020 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B1P20020 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.24■□□□□ 0.83
ATP2B1P20020 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2B1P20020 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATP2B1P20020 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B1P20020 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATP2B1P20020 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATP2B1P20020 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 AC133963.1-201ENST00000504166 1679 ntBASIC20.23■□□□□ 0.83
ATP2B1P20020 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP2B1P20020 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2B1P20020 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP2B1P20020 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2B1P20020 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2B1P20020 AP005901.3-202ENST00000581653 237 ntBASIC20.23■□□□□ 0.83
ATP2B1P20020 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP2B1P20020 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP2B1P20020 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP2B1P20020 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP2B1P20020 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP2B1P20020 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ATP2B1P20020 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2B1P20020 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 UPK3BP1-201ENST00000428678 509 ntBASIC20.22■□□□□ 0.83
ATP2B1P20020 LINC00265-3P-201ENST00000447588 903 ntBASIC20.22■□□□□ 0.83
ATP2B1P20020 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2B1P20020 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP2B1P20020 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATP2B1P20020 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATP2B1P20020 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2B1P20020 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2B1P20020 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2B1P20020 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATP2B1P20020 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2B1P20020 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
ATP2B1P20020 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATP2B1P20020 TOB2P1-201ENST00000469761 992 ntBASIC20.21■□□□□ 0.83
ATP2B1P20020 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2B1P20020 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.21■□□□□ 0.83
ATP2B1P20020 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2B1P20020 AC069148.1-201ENST00000608741 768 ntBASIC20.21■□□□□ 0.83
ATP2B1P20020 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 AC092119.3-201ENST00000612618 583 ntBASIC20.21■□□□□ 0.83
ATP2B1P20020 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2B1P20020 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2B1P20020 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2B1P20020 BX276092.7-203ENST00000637198 1536 ntBASIC20.21■□□□□ 0.83
ATP2B1P20020 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B1P20020 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP2B1P20020 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms