Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ERCC2P18074 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC2P18074 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
ERCC2P18074 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC2P18074 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
ERCC2P18074 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC2P18074 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.06■□□□□ 0.48
ERCC2P18074 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC2P18074 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC2P18074 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC2P18074 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
ERCC2P18074 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC2P18074 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC2P18074 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERCC2P18074 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC2P18074 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC2P18074 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERCC2P18074 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
ERCC2P18074 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.05■□□□□ 0.48
ERCC2P18074 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC2P18074 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ERCC2P18074 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 KRT16P4-201ENST00000453883 522 ntBASIC18.05■□□□□ 0.48
ERCC2P18074 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.05■□□□□ 0.48
ERCC2P18074 STK25P1-201ENST00000585406 838 ntBASIC18.05■□□□□ 0.48
ERCC2P18074 AL591684.3-201ENST00000605187 298 ntBASIC18.05■□□□□ 0.48
ERCC2P18074 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.05■□□□□ 0.48
ERCC2P18074 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.05■□□□□ 0.48
ERCC2P18074 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.05■□□□□ 0.48
ERCC2P18074 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC2P18074 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.05■□□□□ 0.48
ERCC2P18074 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC2P18074 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ERCC2P18074 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.04■□□□□ 0.48
ERCC2P18074 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC2P18074 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC2P18074 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC2P18074 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC2P18074 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC2P18074 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC2P18074 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.04■□□□□ 0.48
ERCC2P18074 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC2P18074 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.04■□□□□ 0.48
ERCC2P18074 AC132938.5-201ENST00000624980 1813 ntBASIC18.04■□□□□ 0.48
ERCC2P18074 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.04■□□□□ 0.48
ERCC2P18074 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC2P18074 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC2P18074 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC2P18074 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
ERCC2P18074 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 AC108860.2-201ENST00000562760 2183 ntBASIC18.03■□□□□ 0.48
ERCC2P18074 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.03■□□□□ 0.48
ERCC2P18074 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC2P18074 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms