Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FAM197Y3-203ENST00000618346 717 ntBASIC13.73□□□□□ -0.21
CD28P10747 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.73□□□□□ -0.21
CD28P10747 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CD28P10747 MIR1199-201ENST00000621445 119 ntBASIC13.73□□□□□ -0.21
CD28P10747 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.73□□□□□ -0.21
CD28P10747 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 AC026471.1-201ENST00000564629 3026 ntBASIC13.72□□□□□ -0.21
CD28P10747 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.72□□□□□ -0.21
CD28P10747 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.72□□□□□ -0.21
CD28P10747 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CD28P10747 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 SPDYE21P-201ENST00000413323 827 ntBASIC13.72□□□□□ -0.21
CD28P10747 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.72□□□□□ -0.21
CD28P10747 AC007967.2-201ENST00000432613 625 ntBASIC13.72□□□□□ -0.21
CD28P10747 AL591424.1-201ENST00000442569 1213 ntBASIC13.72□□□□□ -0.21
CD28P10747 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.72□□□□□ -0.21
CD28P10747 KRT18P3-201ENST00000451602 1288 ntBASIC13.72□□□□□ -0.21
CD28P10747 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 PGAM5P1-201ENST00000518923 814 ntBASIC13.72□□□□□ -0.21
CD28P10747 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.72□□□□□ -0.21
CD28P10747 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.72□□□□□ -0.21
CD28P10747 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.72□□□□□ -0.21
CD28P10747 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CD28P10747 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD28P10747 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD28P10747 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD28P10747 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.71□□□□□ -0.21
CD28P10747 AL138781.2-201ENST00000617896 1843 ntBASIC13.71□□□□□ -0.21
CD28P10747 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CD28P10747 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.71□□□□□ -0.21
CD28P10747 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.71□□□□□ -0.21
CD28P10747 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.71□□□□□ -0.21
CD28P10747 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.71□□□□□ -0.21
CD28P10747 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CD28P10747 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.71□□□□□ -0.21
CD28P10747 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.71□□□□□ -0.21
CD28P10747 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms