Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.43■□□□□ 0.54
RARAP10276 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.43■□□□□ 0.54
RARAP10276 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.43■□□□□ 0.54
RARAP10276 AC090616.6-201ENST00000582640 721 ntBASIC18.43■□□□□ 0.54
RARAP10276 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
RARAP10276 AL353801.3-201ENST00000609898 542 ntBASIC18.43■□□□□ 0.54
RARAP10276 IGHV3-41-201ENST00000613121 348 ntBASIC18.43■□□□□ 0.54
RARAP10276 AL590326.2-201ENST00000625139 305 ntBASIC18.43■□□□□ 0.54
RARAP10276 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.43■□□□□ 0.54
RARAP10276 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.43■□□□□ 0.54
RARAP10276 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RARAP10276 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RARAP10276 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.43■□□□□ 0.54
RARAP10276 AC097374.2-201ENST00000618617 1306 ntBASIC18.43■□□□□ 0.54
RARAP10276 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RARAP10276 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARAP10276 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RARAP10276 AC010460.3-201ENST00000511359 1579 ntBASIC18.42■□□□□ 0.54
RARAP10276 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.42■□□□□ 0.54
RARAP10276 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RARAP10276 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.42■□□□□ 0.54
RARAP10276 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.42■□□□□ 0.54
RARAP10276 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
RARAP10276 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.42■□□□□ 0.54
RARAP10276 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RARAP10276 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RARAP10276 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.42■□□□□ 0.54
RARAP10276 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.42■□□□□ 0.54
RARAP10276 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.42■□□□□ 0.54
RARAP10276 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.42■□□□□ 0.54
RARAP10276 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.42■□□□□ 0.54
RARAP10276 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARAP10276 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
RARAP10276 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.41■□□□□ 0.54
RARAP10276 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RARAP10276 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.41■□□□□ 0.54
RARAP10276 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.41■□□□□ 0.54
RARAP10276 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RARAP10276 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RARAP10276 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.41■□□□□ 0.54
RARAP10276 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.41■□□□□ 0.54
RARAP10276 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RARAP10276 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.41■□□□□ 0.54
RARAP10276 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RARAP10276 AC116407.4-201ENST00000623319 1061 ntBASIC18.41■□□□□ 0.54
RARAP10276 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.41■□□□□ 0.54
RARAP10276 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.41■□□□□ 0.54
RARAP10276 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.41■□□□□ 0.54
RARAP10276 AC018695.7-201ENST00000624587 2492 ntBASIC18.41■□□□□ 0.54
RARAP10276 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RARAP10276 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARAP10276 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RARAP10276 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.4■□□□□ 0.54
RARAP10276 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.4■□□□□ 0.54
RARAP10276 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARAP10276 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
RARAP10276 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RARAP10276 AC005104.2-201ENST00000427818 678 ntBASIC18.4■□□□□ 0.54
RARAP10276 AC087388.1-201ENST00000571370 1112 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms