Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RPS2P1-201ENST00000434010 821 ntBASIC15.94■□□□□ 0.14
FREM3P0C091 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 DUTP2-201ENST00000519164 463 ntBASIC15.94■□□□□ 0.14
FREM3P0C091 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.94■□□□□ 0.14
FREM3P0C091 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.94■□□□□ 0.14
FREM3P0C091 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.94■□□□□ 0.14
FREM3P0C091 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.94■□□□□ 0.14
FREM3P0C091 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
FREM3P0C091 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
FREM3P0C091 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.93■□□□□ 0.14
FREM3P0C091 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.93■□□□□ 0.14
FREM3P0C091 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FREM3P0C091 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.93■□□□□ 0.14
FREM3P0C091 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
FREM3P0C091 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.93■□□□□ 0.14
FREM3P0C091 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.93■□□□□ 0.14
FREM3P0C091 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.93■□□□□ 0.14
FREM3P0C091 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.93■□□□□ 0.14
FREM3P0C091 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.93■□□□□ 0.14
FREM3P0C091 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.93■□□□□ 0.14
FREM3P0C091 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
FREM3P0C091 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FREM3P0C091 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.93■□□□□ 0.14
FREM3P0C091 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FREM3P0C091 GNAS-203ENST00000306120 1878 ntBASIC15.93■□□□□ 0.14
FREM3P0C091 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FREM3P0C091 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
FREM3P0C091 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.93■□□□□ 0.14
FREM3P0C091 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
FREM3P0C091 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FREM3P0C091 AL355312.1-201ENST00000407115 2176 ntBASIC15.93■□□□□ 0.14
FREM3P0C091 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 AC012313.1-201ENST00000593393 3059 ntBASIC15.92■□□□□ 0.14
FREM3P0C091 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.92■□□□□ 0.14
FREM3P0C091 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.92■□□□□ 0.14
FREM3P0C091 BX640515.1-201ENST00000617215 977 ntBASIC15.92■□□□□ 0.14
FREM3P0C091 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
FREM3P0C091 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FREM3P0C091 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FREM3P0C091 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FREM3P0C091 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.92■□□□□ 0.14
FREM3P0C091 SLC25A1P1-201ENST00000528351 927 ntBASIC15.92■□□□□ 0.14
FREM3P0C091 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
FREM3P0C091 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.92■□□□□ 0.14
FREM3P0C091 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
FREM3P0C091 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.92■□□□□ 0.14
FREM3P0C091 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms