Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.2■□□□□ 0.66
VTNP04004 AC108073.2-201ENST00000464002 357 ntBASIC19.2■□□□□ 0.66
VTNP04004 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.2■□□□□ 0.66
VTNP04004 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.2■□□□□ 0.66
VTNP04004 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.2■□□□□ 0.66
VTNP04004 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.2■□□□□ 0.66
VTNP04004 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.2■□□□□ 0.66
VTNP04004 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.2■□□□□ 0.66
VTNP04004 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.2■□□□□ 0.66
VTNP04004 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.2■□□□□ 0.66
VTNP04004 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 AC012317.2-201ENST00000623305 2251 ntBASIC19.2■□□□□ 0.66
VTNP04004 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.19■□□□□ 0.66
VTNP04004 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VTNP04004 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VTNP04004 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VTNP04004 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.19■□□□□ 0.66
VTNP04004 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.19■□□□□ 0.66
VTNP04004 AC023274.1-201ENST00000418278 595 ntBASIC19.19■□□□□ 0.66
VTNP04004 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.19■□□□□ 0.66
VTNP04004 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.19■□□□□ 0.66
VTNP04004 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.19■□□□□ 0.66
VTNP04004 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VTNP04004 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
VTNP04004 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.18■□□□□ 0.66
VTNP04004 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
VTNP04004 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.18■□□□□ 0.66
VTNP04004 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.18■□□□□ 0.66
VTNP04004 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.18■□□□□ 0.66
VTNP04004 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.18■□□□□ 0.66
VTNP04004 KRT18P2-201ENST00000447938 1258 ntBASIC19.18■□□□□ 0.66
VTNP04004 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.18■□□□□ 0.66
VTNP04004 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.18■□□□□ 0.66
VTNP04004 MIR4751-201ENST00000578027 74 ntBASIC19.18■□□□□ 0.66
VTNP04004 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.18■□□□□ 0.66
VTNP04004 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.18■□□□□ 0.66
VTNP04004 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.18■□□□□ 0.66
VTNP04004 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VTNP04004 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.18■□□□□ 0.66
VTNP04004 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.18■□□□□ 0.66
VTNP04004 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VTNP04004 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.17■□□□□ 0.66
VTNP04004 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VTNP04004 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.17■□□□□ 0.66
VTNP04004 IGHV3-65-201ENST00000523210 341 ntBASIC19.17■□□□□ 0.66
VTNP04004 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
VTNP04004 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.17■□□□□ 0.66
VTNP04004 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.17■□□□□ 0.66
VTNP04004 AC040169.1-201ENST00000565382 521 ntBASIC19.17■□□□□ 0.66
VTNP04004 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.17■□□□□ 0.66
VTNP04004 AC010327.4-202ENST00000591484 748 ntBASIC19.17■□□□□ 0.66
VTNP04004 AL353135.1-201ENST00000606729 504 ntBASIC19.17■□□□□ 0.66
VTNP04004 AC008667.4-201ENST00000607370 168 ntBASIC19.17■□□□□ 0.66
VTNP04004 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.17■□□□□ 0.66
VTNP04004 AC004790.2-201ENST00000623588 572 ntBASIC19.17■□□□□ 0.66
VTNP04004 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms