Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
OPN1SWP03999 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.42■□□□□ 0.22
OPN1SWP03999 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
OPN1SWP03999 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 BX276092.7-203ENST00000637198 1536 ntBASIC16.42■□□□□ 0.22
OPN1SWP03999 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.42■□□□□ 0.22
OPN1SWP03999 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 AC093827.2-201ENST00000512654 315 ntBASIC16.42■□□□□ 0.22
OPN1SWP03999 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.42■□□□□ 0.22
OPN1SWP03999 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
OPN1SWP03999 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
OPN1SWP03999 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
OPN1SWP03999 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
OPN1SWP03999 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
OPN1SWP03999 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
OPN1SWP03999 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
OPN1SWP03999 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.41■□□□□ 0.22
OPN1SWP03999 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
OPN1SWP03999 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
OPN1SWP03999 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
OPN1SWP03999 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.41■□□□□ 0.22
OPN1SWP03999 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
OPN1SWP03999 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
OPN1SWP03999 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.41■□□□□ 0.22
OPN1SWP03999 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 LIN28AP1-201ENST00000429574 405 ntBASIC16.41■□□□□ 0.22
OPN1SWP03999 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.41■□□□□ 0.22
OPN1SWP03999 ATP5G1P1-201ENST00000448724 379 ntBASIC16.41■□□□□ 0.22
OPN1SWP03999 AC092597.1-201ENST00000487352 616 ntBASIC16.41■□□□□ 0.22
OPN1SWP03999 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.41■□□□□ 0.22
OPN1SWP03999 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.41■□□□□ 0.22
OPN1SWP03999 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
OPN1SWP03999 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
OPN1SWP03999 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPN1SWP03999 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
OPN1SWP03999 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.4■□□□□ 0.22
OPN1SWP03999 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.4■□□□□ 0.22
OPN1SWP03999 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
OPN1SWP03999 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.4■□□□□ 0.22
OPN1SWP03999 HLA-F-220ENST00000434407 884 ntBASIC16.4■□□□□ 0.22
OPN1SWP03999 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.4■□□□□ 0.22
OPN1SWP03999 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 COX11P1-201ENST00000489116 835 ntBASIC16.4■□□□□ 0.22
OPN1SWP03999 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.4■□□□□ 0.22
OPN1SWP03999 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPN1SWP03999 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.4■□□□□ 0.22
OPN1SWP03999 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms