Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
MT-ND1P03886 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 AC022898.2-201ENST00000616822 1312 ntBASIC16.6■□□□□ 0.25
MT-ND1P03886 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
MT-ND1P03886 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.6■□□□□ 0.25
MT-ND1P03886 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MT-ND1P03886 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MT-ND1P03886 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.59■□□□□ 0.25
MT-ND1P03886 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MT-ND1P03886 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 EGLN1P1-201ENST00000531623 762 ntBASIC16.59■□□□□ 0.25
MT-ND1P03886 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 AC010240.3-201ENST00000607688 395 ntBASIC16.59■□□□□ 0.25
MT-ND1P03886 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
MT-ND1P03886 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND1P03886 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
MT-ND1P03886 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND1P03886 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
MT-ND1P03886 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MT-ND1P03886 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.58■□□□□ 0.25
MT-ND1P03886 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MT-ND1P03886 FER1L4-210ENST00000615531 5998 ntBASIC16.58■□□□□ 0.25
MT-ND1P03886 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MT-ND1P03886 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.58■□□□□ 0.24
MT-ND1P03886 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.58■□□□□ 0.24
MT-ND1P03886 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
MT-ND1P03886 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.58■□□□□ 0.24
MT-ND1P03886 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.58■□□□□ 0.24
MT-ND1P03886 AC128688.1-201ENST00000487626 519 ntBASIC16.58■□□□□ 0.24
MT-ND1P03886 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 MIR4497-201ENST00000583208 89 ntBASIC16.58■□□□□ 0.24
MT-ND1P03886 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
MT-ND1P03886 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
MT-ND1P03886 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.58■□□□□ 0.24
MT-ND1P03886 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
MT-ND1P03886 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.58■□□□□ 0.24
MT-ND1P03886 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MT-ND1P03886 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
MT-ND1P03886 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MT-ND1P03886 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND1P03886 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.58■□□□□ 0.24
MT-ND1P03886 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.57■□□□□ 0.24
MT-ND1P03886 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MT-ND1P03886 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.57■□□□□ 0.24
MT-ND1P03886 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.57■□□□□ 0.24
MT-ND1P03886 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms